Some of you may already know this, and if you do I forgive you for not sharing it with those who don't.
If you open up any of your teams' pages, past or present, and click on this link:
http://onlinegames.strat-o-matic.com/team/draft/rank, it will show your Draft Ranking list from before the Auto Draft took place. So if there are any discrepancies you can always get to it after the fact. As far as I know there is no direct link to it from the main team page once the Autodraft has taken place, but you can still see your list using the link here. For ease, I've created a shortcut in my browser for it.